JPOST Repository / Database Japan Japan Proteome Standard Repository/Database

Recent posts

event

JCompMS 4th hackathon

2025-05-15 jpost

Hackathon details in Japanese

event

JCompMS 9th workshop

2024-04-4 jpost

Workshop details in Japanese

other

jPOST repository will be stopped. (on Nov. 24-46)

2023-11-24 jpost

jPOSTrepo will be unavailable during the time shown below due to a scheduled system maintenance. We thank you for your understanding and cooperation in this matter. Date and Time: Friday, November 24, 17:00 – Sunday, November 26, 18:00 (UTC+9)

event

Proteome Data Analysis Seminar -MaxQuant workshop-

2023-09-17 jpost

We will hold a proteome data analysis seminar “MaxQuant workshop” on October 5 (Thu.) and 6 (Fri.), 2023 at Miraikan in Odaiba, Tokyo. This is an opportunity to learn how to use MaxQuant from the development team, and we look forward to your participation. MaxQuant workshop [poster] MaxQuant is a quantitative proteomics software package designed for analyzing large mass-spectrometric data sets. This workshop is a training course (in English) on the use of MaxQuant by the development team. Date: 5 (Thu.) – 6 (Fri.) Oct 2023, 10:00〜18:00 Venue: Miraikan 7F Conference Room Uranus Registration fee: Free Capacity: 30 Registration: https://forms.gle/PEeDUZcQ3mqDvPiQA Contents ・MaxQuant DDA ・DDA labeled quantification ・DDA label free quantification […]

event

JCompMS 8th workshop

2023-04-7 jpost

Workshop details in Japanese

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Gadgets

Mass spectrometry-based proteomics needs a variety of tools for data processing, quantification, data integration, and so on.
jPOST project team has developed a variety of tools for proteome analysis, and the jPOST gadget is a collection of these tools we have developed as well as other commonly used tools for mass spectrometry-based proteomics.

jPOST tool box

Kinapple
http://seizai.pharm.kyoto-u.ac.jp/kinapple

iMPAQT-Quant
https://impaqt.jpostdb.org/iMPAQT/
Related tool box

Mass++
https://www.mspp.ninja/?lang=en_us

Phos-tag SDS-PAGE database
http://phostag.hiroshima-u.ac.jp/index(E).html
Search engines

Mascot
http://www.matrixscience.com/

Andromeda (part of MaxQuant)
http://coxdocs.org/doku.php?id=maxquant:andromeda:start

SEQUEST
http://proteomicswiki.com/wiki/index.php/SEQUEST_installation_instructions

X!Tandem
https://www.thegpm.org/TANDEM/
Members of ProteomeXchange consortium

PRIDE
https://www.ebi.ac.uk/pride/

PeptideAtlas
http://www.peptideatlas.org/

MassIVE
http://massive.ucsd.edu/ProteoSAFe/static/massive.jsp

iProX
http://www.iprox.org/

Panorama Public
https://panoramaweb.org/labkey/project/Panorama%20Public/begin.view?

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